Reference Armadillo v1.1

NamePhyloNet - RiataHGT
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Publication(s)L. Nakhleh, D. Ruths, and L. S. Wang. RIATA-HGT: A Fast and Accurate Heuristic for Reconstruction Horizontal Gene Proceedings of the 11th International Computing and Combinatorics Conference (COCOON 05). LNCS #3595 (L. Wang, editor), 84-93. 2005.

Websitehttp://bioinfo.cs.rice.edu/phylonet/

DescriptionPhyloNet is aimed mainly at providing a suite of tools for reconstructing and analyzing reticulate (non-treelike) evolutionary relationships. In particular, the software package includes features for inferring horizontal gene transfer from a pair of species/gene trees, and detecting interspecific recombination breakpoints in a sequence alignment. By: L. Nakhleh, D. Ruths, and L. S. Wang.

Input (2) MultipleTrees
Tree
Output (2) Results
OutputText
Keywords (1) Horizontal gene transfer detection  
Related (2) HGT Detector 3.2  LatTrans  
Sample workflowPhyloNet_riatahgt.properties.db